Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-07-16 |  |
Full-length human cystathionine beta-synthase with c-terminal his-tag [1740 multi-frame micrographs composed of 46 frames each in TIFF format] | McCorvie TJ, Basle A [Pubmed: 38575566] [DOI: 10.1038/s41467-024-46864-x] |
2.4 TB | 3.8 - 3.9 Å |
| 2025-07-16 |  |
Full-length human cystathionine beta-synthase with c-terminal his-tag in the presence of SAM [11220 multi-frame micrographs composed of 44 frames each in TIFF format] | McCorvie TJ, Basle A [Pubmed: 38575566] [DOI: 10.1038/s41467-024-46864-x] |
4.2 TB | 4.0 - 4.1 Å |
| 2025-07-16 |  |
Multi-frame cryo-EM images of a 69 kDa KRAS:G12C-2H11.4DS Fab complex [5013 multi-frame micrographs composed of 119 frames each in TIFF format] | Kung JE, Caleigh A [Pubmed: 38798381] [DOI: 10.1101/2024.05.10.593593] |
1.9 TB | 2.8 Å |
| 2025-07-16 |  |
Micrographs for mouse alpha synuclein [multiple data sets in MRC format] | Tatli M, Sokratian A, Zhou Y [Pubmed: 39485845] [DOI: 10.1126/sciadv.adq3539] |
467.9 GB | 2.9 - 3.1 Å |
| 2025-07-14 |  |
Multi-frame micrographs of a 74 kDa Ang2-5A12.6DS Fab complex in tiff format. [10063 multi-frame micrographs composed of 119 frames each in TIFF format] | Kung JE, Johnson MC [Pubmed: 38798381] [DOI: 10.1101/2024.05.10.593593] |
4.3 TB | 2.7 Å |
| 2025-07-12 |  |
Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain [19338 multi-frame micrographs composed of 50 frames each in TIFF format] | Campbell EA, Small GI, Darst SA [Pubmed: 37890482] [DOI: 10.1016/j.molcel.2023.10.001] |
5.4 TB | 3.01 - 3.06 Å |
| 2025-07-12 |  |
Cryo-EM of SARS-CoV-2 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
20.1 TB | 4.7 Å |
| 2025-07-12 |  |
Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys [multiple data sets in TIFF and MRC formats] | Basu RS, Gagnon MG, Polikanov YS [Pubmed: 40536958] [DOI: 10.1126/science.ads9030] |
4.1 TB | 2.13 Å |
| 2025-07-12 |  |
Cryo-EM captures early intermediate steps in dynein activation by LIS1 [12792 multi-frame micrographs composed of 50 frames each in EER format] | Nguyen KHV, Karasmanis EP, Kendrick AA, Reck-Peterson SL, Leschziner AE | 10.9 TB | 2.7 - 6.2 Å |
| 2025-07-10 |  |
Cryo-EM SPA dataset of Streptococcus pneumoniae NADPH oxidase with NADPH under turnover conditions [22290 multi-frame micrographs composed of 1036 frames each in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
9.4 TB | 2.2 Å |
| 2025-07-10 |  |
Cryo-EM of HCoV-229E 5' proximal stem-loop 5 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38076883] [DOI: 10.1101/2023.11.22.567964] |
10.9 TB | 6.5 Å |
| 2025-07-10 |  |
Single particle cryoEM dataset of nucleosomes containing H2AK119ub [12211 multi-frame micrographs composed of 199 frames each in EER format] | Hicks CW, Wolberger C [Pubmed: 39149911] [DOI: 10.1093/nar/gkae698] |
6.6 TB | 3.41 - 3.47 Å |
| 2025-07-10 |  |
Cryo-electron micrographs of human phosphorylated STAT1-DNA complexes [6993 multi-frame micrographs composed of 54 frames each in TIFF format] | Minami M, Sugiyama A, Hirose M, Sugita Y, Ose T [Pubmed: 40100957] [DOI: 10.1126/scisignal.ads2210] |
1.9 TB | 3.84 Å |
| 2025-07-10 |  |
Unaligned multi-frame micrographs of DNA polymerase theta helicase domain with AMP-PNP [671 multi-frame micrographs composed of 2130 frames each in EER format] | Ito F, Li Z, Khant HA, Chen XS [Pubmed: 40253368] [DOI: 10.1038/s41467-025-58441-x] |
660.2 GB | 3.5 Å |
| 2025-07-10 |  |
Electron Cryomicroscopy of alpha-Latrotoxin [87895 micrographs in MRC format] | Klink B, Kalyankumar KS, Gatsogiannis C [Pubmed: 39362850] [DOI: 10.1038/s41467-024-52635-5] |
2.7 TB | 2.7 - 6.7 Å |
| 2025-07-10 |  |
Motion corrected micrographs [32306 multi-frame micrographs composed of 30 frames each in MRCS format] | Arni Thorlacius AT, Maksim Rulev MR, Oscar Sundberg OS, Anna Sundborger-Lunna ASL [Pubmed: 39910321] [DOI: 10.1038/s42003-025-07610-1] |
5.8 TB | 3.45 - 3.88 Å |
| 2025-07-10 |  |
Single Particle Analysis of the Retron IA Surveillance Complex [11394 multi-frame micrographs composed of 37 frames each in TIFF format] | Burman N, Thomas George J, Wilkinson R, Wiedenheft B [Pubmed: 40196496] [DOI: 10.1101/2025.03.26.645336] |
3.2 TB | 2.99 - 3.13 Å |
| 2025-07-10 |  |
Cryo-EM structure of the trimeric GST-DRT9 fusion complex [10112 multi-frame micrographs composed of 39 frames each in TIFF format] | Burman N, Pandey S, Wiedenheft B, Sternberg SH [Pubmed: 40436039] [DOI: 10.1038/s41586-025-09179-5] |
2.6 TB | 3.2 Å |
| 2025-07-10 |  |
Cryo-EM structure of the hexameric SenDRT9 ribonucleoprotein complex [9529 multi-frame micrographs composed of 39 frames each in TIFF format] | Burman N, Pandey S, Wiedenheft B, Sternberg SH [Pubmed: 40436039] [DOI: 10.1038/s41586-025-09179-5] |
2.8 TB | 2.6 Å |
| 2025-07-10 |  |
Integrin αvβ6 in complex with minibinder [1874 multi-frame micrographs composed of 100 frames each in TIFF format] | Fernandez A, Campbell MG [Pubmed: 37704610] [DOI: 10.1038/s41467-023-41272-z] |
1.7 TB | 3.4 Å |
| 2025-07-10 |  |
Integrin αvβ8 in complex with minibinder [4535 multi-frame micrographs composed of 100 frames each in TIFF format] | Fernandez A, Campbell MG [Pubmed: 37704610] [DOI: 10.1038/s41467-023-41272-z] |
4.0 TB | 2.9 Å |
| 2025-07-10 |  |
Cryo-electron tomography of permeabilised CEM T lymphoblasts incubated with isolated HIV-1 cores [62 tilt series in MRC format] | Hou Z, Fronik S, Shen Y, Chen L, Thompson C, Neumann S, Zhang PJ | 9.9 GB | 12.5 Å |
| 2025-07-08 |  |
IsoVEM: Accurate and Robust Isotropic Reconstruction for Volume Electron Microscopy Using a Video Transformer [158 micrographs in TIFF format] | He J, Zhang Y, Sun WH, Li A, Li XX, Liu GL, Yang G, Sun F | 4.4 GB | — |
| 2025-07-08 |  |
Micrographs for EMD-45746, EMD-45645, EMD-45646, and EMD-45665: Structure of WT DosP bound to c-di-GMP [6324 multi-frame micrographs composed of 50 frames each in TIFF format] | Kober DL, Kumar P [Pubmed: 39511182] [DOI: 10.1038/s41467-024-53942-7] |
3.6 TB | 3.11 Å |
| 2025-07-08 |  |
Raw cryo-EM micrographs from the publication "Structure and Function of Stator Units of the Bacterial Flagellar Motor" [47590 multi-frame micrographs composed of 40 frames each in MRC format] | Santiveri M, Roa-Eguiara A, Kühne C, Wadhwa N, Hu H, Berg HC, Erhardt M, Taylor NMI [Pubmed: 32931735] [DOI: 10.1016/j.cell.2020.08.016] |
12.3 TB | 2.98 - 3.1 Å |
