Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-07-30 |  |
CryoEM structure of a synthetic antibody, COP-2, in complex with the C-terminal domain of Clostridium perfringens Enterotoxin [12415 micrographs in MRC format] | Ogbu CP, Goldbach NM, Pacesa M, Kapoor S, Correia BE, Vecchio AJ | 775.9 GB | 2.95 Å |
| 2025-07-30 |  |
SpCas9 with computationally designed SpCas9_b10 binder [13575 multi-frame micrographs composed of 40 frames each in MRC format] | Pacesa M, Nickel L, Correia BE [Pubmed: 39677777] [DOI: 10.1101/2024.09.30.615802] |
5.1 TB | 3.33 Å |
| 2025-07-30 |  |
70S initiation complex (tRNA-fMet M1 + AUG start codon) [2267 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
629.3 GB | 2.75 Å |
| 2025-07-30 |  |
70S initiation complex (tRNA-fMet M1 + GUG start codon) [2440 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
705.7 GB | 2.61 Å |
| 2025-07-30 |  |
70S initiation complex (tRNA-fMet M1 + UUG start codon) [2441 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
705.9 GB | 2.59 Å |
| 2025-07-30 |  |
70S initiation complex (tRNA-fMet M1 + CUG start codon) [3155 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
941.0 GB | 2.63 Å |
| 2025-07-30 |  |
70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon) [4216 multi-frame micrographs composed of 29 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
3.0 TB | 2.6 Å |
| 2025-07-30 |  |
Turnip Crinkle Virus: virions (TCV-M) [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 273.2 GB | 3.43 Å |
| 2025-07-30 |  |
Turnip Crinkle Virus: virus-like particles (TCV-P38) [multiple data sets in MRC and TIFF formats] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 2.8 TB | 3.47 Å |
| 2025-07-30 |  |
Satellite Tobacco Necrosis Virus-1 [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G [Pubmed: 40706701] [DOI: 10.1016/j.jmb.2025.169352] |
512.5 GB | 2.77 Å |
| 2025-07-26 |  |
Raw .tiff images of Panx1 lacking c-terminal activating domain stack 1 [4267 multi-frame micrographs composed of 50 frames each in TIFF format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
2.3 TB | 2.9 Å |
| 2025-07-26 |  |
In situ cryo-ET visualization of mitochondrial depolarization and mitophagic engulfment [multiple data sets in TIFF and EER formats] | Herrmann EH [DOI: 10.1101/2025.03.24.645001] |
766.8 GB | 21.0 Å |
| 2025-07-25 |  |
Cryo-EM structure of E. coli cellulose synthase subunit C with cellotetraose [8674 multi-frame micrographs composed of 40 frames each in TIFF format] | Verma P, Zimmer J [Pubmed: 39242554] [DOI: 10.1038/s41467-024-51838-0] |
2.3 TB | 3.8 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the revitrified T20S proteasome [6105 multi-frame micrographs composed of 47 frames each in TIFF format] | Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
920.8 GB | 2.5 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the conventional T20S proteasome [3479 multi-frame micrographs composed of 50 frames each in TIFF format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
589.6 GB | 2.6 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the deposited and revitrified T20S proteasome [3641 multi-frame micrographs composed of 50 frames each in TIFF format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
555.0 GB | 2.8 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the conventional 50S ribosomal subunit [11121 multi-frame micrographs composed of 693 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
3.1 TB | 3.5 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the revitrified 50S ribosomal subunit [6174 multi-frame micrographs composed of 693 frames each in EER format] | Straub MS, Hruby J, Drabbels M, Lorenz UJ | 2.7 TB | — |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the deposited and revitrified 50S ribosomal subunit [9532 multi-frame micrographs composed of 693 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
2.5 TB | 3.4 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the shaped pulse revitrified 50S ribosomal subunit [7725 multi-frame micrographs composed of 45 frames each in TIFF format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
1.1 TB | 2.9 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of the revitrified HIV-1 envelope protein [10528 multi-frame micrographs composed of 1287 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
5.9 TB | 3.8 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of conventional Hemagglutinin [2251 multi-frame micrographs composed of 1179 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
768.8 GB | 2.9 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of revitrified Hemagglutinin [6476 multi-frame micrographs composed of 630 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
2.9 TB | 2.8 Å |
| 2025-07-25 |  |
Single Particle cryo-EM dataset of deposited and revitrified Hemagglutinin [10114 multi-frame micrographs composed of 621 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
2.5 TB | 3.0 Å |
| 2025-07-25 |  |
Dynamic fibrillar assembly of αB-crystallin induced by perturbation of the conserved NT-IXI motif resolved by cryo-EM [10654 multi-frame micrographs composed of 45 frames each in TIFF format] | McFarland RM, Reichow SR, Noroozi RN, Miller AM [Pubmed: 39609421] [DOI: 10.1038/s41467-024-54647-7] |
4.2 TB | 3.4 Å |
