Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-07-25 |  |
Genomic and structural insights into Jyvaskylavirus, the first giant virus isolated from Finland [17270 multi-frame micrographs composed of 40 frames each in TIFF format] | Abrescia NGA, Arriaga I, Almeida GD [Pubmed: 40131223] [DOI: 10.7554/eLife.103492] |
1.6 TB | 6.3 Å |
| 2025-07-25 |  |
Single-particle cryoEM data of copper-loaded ABC transporter MsbA trapped with ADP-vanadate [4221 multi-frame micrographs composed of 40 frames each in TIFF format] | Lyu J, Liu C, Zhang T, Schrecke S, Elam NP, Packianathan C, Hochberg GKA, Russell D, Zhao M, Laganowsky A [Pubmed: 36435815] [DOI: 10.1038/s41467-022-34905-2] |
1.9 TB | 3.47 Å |
| 2025-07-25 |  |
Single particle cryoEM data of Human OGG1 bound at the nucleosomal DNA entry site [17116 multi-frame micrographs composed of 75 frames each in TIFF format] | You Q, Feng X, Cai Y, Baylin SB, Li H [Pubmed: 39341999] [DOI: 10.1038/s42003-024-06919-7] |
8.9 TB | 3.2 Å |
| 2025-07-25 |  |
Single-particle cryoEM data of copper-loaded ABC transporter MsbA [5530 multi-frame micrographs composed of 40 frames each in TIFF format] | Lyu J, Liu C, Zhang T, Schrecke S, Elam NP, Packianathan C, Hochberg GKA, Russell D, Zhao M, Laganowsky A [Pubmed: 36435815] [DOI: 10.1038/s41467-022-34905-2] |
2.5 TB | 3.9 Å |
| 2025-07-25 |  |
Single-particle cryoEM data of copper-loaded ABC transporter MsbA in the presence of ATP for 6 hours [5831 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang T, Lyu J, Yang B, Zhao M, Laganowsky AD [Pubmed: 38717904] [DOI: 10.1016/j.celrep.2024.114171] |
2.8 TB | 2.68 - 20.0 Å |
| 2025-07-25 |  |
Cryo electron microscopy structure of human SIRT7 bound to a H3K36MTU modified nucleosome [8623 micrographs in MRC format] | Ekundayo BE, Ni D, Stahlberg H [Pubmed: 39900593] [DOI: 10.1038/s41467-025-56529-y] |
538.9 GB | 2.8 Å |
| 2025-07-25 |  |
Cryo-EM structure of hydroxychloroquine-bound human SLC19A3 in inward-open state [9492 multi-frame micrographs composed of 58 frames each in TIFF format] | Gabriel FG [Pubmed: 39358356] [DOI: 10.1038/s41467-024-52872-8] |
2.6 TB | 3.0 Å |
| 2025-07-25 |  |
movies for NKCC1 bound with torsemide [12824 multi-frame micrographs composed of 50 frames each in TIFF format] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
5.6 TB | 2.6 Å |
| 2025-07-25 |  |
Cryo-electron micrographs of Cholinephosphotransferase in complex with selective inhibitor chelerythrine [multiple data sets in TIFF and MRC formats] | Roberts JR [Pubmed: 39747155] [DOI: 10.1038/s41467-024-55673-1] |
1.0 TB | 3.1 Å |
| 2025-07-25 |  |
Cryo-electron micrographs of Cholinephosphotransferase in complex with CDP-choline and phosphatidylcholine [multiple data sets in TIFF format] | Roberts JR [Pubmed: 39747155] [DOI: 10.1038/s41467-024-55673-1] |
4.0 TB | 2.9 Å |
| 2025-07-25 |  |
Cryo-electron micrographs of Cholinephosphotransferase in complex with DAG in MSP1E3D1 nanodiscs [multiple data sets in TIFF and MRC formats] | Roberts JR [Pubmed: 39747155] [DOI: 10.1038/s41467-024-55673-1] |
1.5 TB | 3.71 Å |
| 2025-07-25 |  |
Raw data used to generate the structures of Arp2/3 complex bound to NPFs [multiple data sets in TIFF format] | Saks AJ, Barrie KR, Rebowski G, Dominguez R [DOI: 10.1073/pnas.2421557122] |
4.5 TB | 2.85 - 3.41 Å |
| 2025-07-25 |  |
Cryo electron micrographs of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2 [multiple data sets in TIFF and MRCS formats] | Wang Y, Dong A [Pubmed: 40359943] [DOI: 10.1016/j.str.2025.04.015] |
1.3 TB | 2.81 - 3.05 Å |
| 2025-07-25 |  |
Structure of Stl2, the transcriptional repressor of S. aureus Pathogenicity Island 2 [6233 micrographs in EER format] | Qiao CCQ, Debiasi-Anders GDA, Mir-Sanchis IMS [Pubmed: 39987160] [DOI: 10.1038/s41467-025-57156-3] |
2.9 TB | 3.69 Å |
| 2025-07-25 |  |
Cryo-EM of RNAP post-terminal complexes on negatively supercoiled DNA [multiple data sets in TIFF format] | Brewer JJ, Inlow K, Mooney RA, Bosch B, Olinares PDB, Marcelino LP, Chait BT, Landick R, Gelles J, Campbell EA, Darst SA [Pubmed: 39779919] [DOI: 10.1038/s41594-024-01447-8] |
1.3 TB | 4.69 Å |
| 2025-07-25 |  |
Demo apoferritin data for Magellon [multiple data sets in MRC and TIFF formats] | Stagg SM | 117.2 GB | 2.7 Å |
| 2025-07-25 |  |
Legobody dimer [1964 multi-frame micrographs composed of 50 frames each in MRC format] | Pacesa M, Van Hall-Beauvais A, Marchand A, Georgeon S, Correia BE | 1.4 TB | 3.2 Å |
| 2025-07-25 |  |
Uncharacterized Q8U0N8 protein from Pyrococcus furiosus [6465 multi-frame micrographs composed of 50 frames each in EER format] | Schweke H, Pacesa M, Levin T, Goverde CA, Kumar P, Duhoo Y, Dornfeld LJ, Dubreuil B, Georgeon S, Ovchinnikov S, Woolfson DN, Correia BE, Dey S, Levy ED [Pubmed: 38325366] [DOI: 10.1016/j.cell.2024.01.022] |
4.5 TB | 2.79 Å |
| 2025-07-25 |  |
Cysteine tRNA ligase homodimer [multiple data sets in MRC and EER formats] | Schweke H, Pacesa M, Levin T, Goverde CA, Kumar P, Duhoo Y, Dornfeld LJ, Dubreuil B, Georgeon S, Ovchinnikov S, Woolfson DN, Correia BE, Dey S, Levy ED [Pubmed: 38325366] [DOI: 10.1016/j.cell.2024.01.022] |
12.8 TB | 2.8 Å |
| 2025-07-25 |  |
Raw .tiff images of Panx1 containing c-terminal activating domain stack 1 [3318 multi-frame micrographs composed of 50 frames each in TIFF format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
2.1 TB | 3.0 Å |
| 2025-07-25 |  |
Raw .tiff images of Panx1 containing c-terminal activating domain stack 2 [3340 multi-frame micrographs composed of 50 frames each in TIFF format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
1.8 TB | 3.0 Å |
| 2025-07-25 |  |
Raw .tiff images of Panx1 lacking c-terminal activating domain stack 2 [4400 multi-frame micrographs composed of 50 frames each in TIFF format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
2.4 TB | 2.9 Å |
| 2025-07-25 |  |
Motion corrected .mrc images of Panx1 containing c-terminal activating domain stack 1 [3895 micrographs in MRC format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
1.3 TB | 3.0 Å |
| 2025-07-25 |  |
Motion corrected .mrc images of Panx1 lacking c-terminal activating domain stack 2 [4999 micrographs in MRC format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
1.7 TB | 2.9 Å |
| 2025-07-25 |  |
Motion corrected micrographs for CULLIN3-KLHL22-RBX1 complex [16178 micrographs in MRC format] | Su M.-Y. [Pubmed: 37788672] [DOI: 10.1016/j.str.2023.09.002] |
1.4 TB | 2.59 - 3.67 Å |
