Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-09-18 |  |
Single-particle cryo-EM data of Rhodobacter capsulatus cytochrome bc1 complex with bound endogenous ubiquinone [8883 multi-frame micrographs composed of 40 frames each in TIFF format] | Pietras R, Mielecki B, Sarewicz M, Jaciuk M, Koziej L, Glatt S, Osyczka A [Pubmed: 42679026] [DOI: 10.1073/pnas.2618242123] |
3.1 TB | 2.16 Å |
| 2026-09-18 |  |
WINSdata ROI crops of synchrotron micro-CT applied to the human placenta; EMBO Course 2026 - Volume-Segmantics Training Dataset [4 reconstructed volumes in TIFF format] | Tun W. M, Poologasundarampillai G, Bischof H, Nye G, King O. N. F, Basham M, Tokudome Y, Lewis R. M, Johnstone E. D, Brownbill P, Darrow M, Chernyavsky I. L [DOI: 10.1098/rsif.2021.0140] |
1.1 GB | — |
| 2026-09-14 |  |
Single-particle cryo-EM dataset of Rhodobacter capsulatus cytochrome bc1 complex with 2-alanine insertion in the neck region of iron-sulphur protein (+2Ala mutant) [5166 multi-frame micrographs composed of 40 frames each in TIFF format] | Pietras R, Mielecki B, Sarewicz M, Jaciuk M, Koziej L, Glatt S, Osyczka A [Pubmed: 42679026] [DOI: 10.1073/pnas.2618242123] |
1.8 TB | 2.41 Å |
| 2026-09-11 |  |
Experimentally-grounded benchmark datasets for cryoEM heterogeneous reconstruction methods with engineered Cas9 complexes [multiple data sets in EER and MRCS formats] | Grassetti AV, Kinman LF, Davis JH [DOI: 10.64898/2026.05.04.721978] |
33.2 TB | 2.33 - 3.09 Å |
| 2026-09-11 |  |
STA structure of CA hexamer from HIV-1 CA-NC tube [56 tilt series in MRC format] | Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P [DOI: 10.64898/2026.05.07.723526] |
140.6 GB | 4.9 Å |
| 2026-09-11 |  |
CryoET STA structure of CA hexamer from HIV-1 CA-NC tube in complex with Myxovirus resistance protein B (MxB, also designated Mx2) N-terminus 1-35 [53 tilt series in MRC format] | Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P [DOI: 10.64898/2026.05.07.723526] |
175.3 GB | 4.4 Å |
| 2026-09-09 |  |
Cellular hallmarks from volume electron microscopy reveal development progression of Plasmodium ookinetes [1 reconstructed volumes in MRC format] | Hildenbrand K | 7.4 GB | — |
| 2026-09-07 |  |
Cryo-EM structure of human Nhe6 [4933 multi-frame micrographs composed of 1134 frames each in EER format] | Feilen LP, Tranchant EE, Lalic MR, Sach L, Havelund JF, Ostendorf J, Faergeman NJK, Pedersen SF, Kragelund BB, Autzen HE | 2.3 TB | 3.4 - 3.5 Å |
| 2026-09-07 |  |
Myosin Filaments of Vertebrate Skeletal and Cardiac Muscle are Highly Similar, but not Identical [17280 micrographs in MRC format] | Gholami tilko PGT, Rastegarpouyani HR, Ghazi Esfahani BGE, Pinto JRP, Taylor KAT [DOI: 10.64898/2026.02.16.706210] |
1.1 TB | 9.94 Å |
| 2026-09-07 |  |
Cryo-EM structure of a preformed dimer of the C. elegans EGFR (LET-23) extracellular region [multiple data sets in TIFF and MRC formats] | Zuo Y, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
3.7 TB | 2.9 Å |
| 2026-09-04 |  |
Cryo electron microscopy of amyloid fibrils of recombinant transforming growth factor beta induced protein FAS1-4 domain with V624M mutation [1339 multi-frame micrographs composed of 2151 frames each in EER format] | Jiang YX, Sawaya MR | 806.5 GB | 3.24 Å |
| 2026-09-04 |  |
Cryo-EM structure of B/Lee/1940 hemagglutinin trimer in complex with three KL-BHA-3F4 Fab fragments [13508 multi-frame micrographs composed of 36 frames each in TIFF format] | Bajic GB, Civljak AC, Bonnettaz BB | 2.5 TB | 2.4 Å |
| 2026-09-04 |  |
Cryo-EM structure of B/Lee/1940 hemagglutinin trimer in complex with three KL-BHA-4C2 Fab fragments [7412 multi-frame micrographs composed of 35 frames each in TIFF format] | Bajic GB, Civljak AC, Bonnettaz BB | 1.5 TB | 2.61 Å |
| 2026-09-04 |  |
Cryo-EM structure of B/Phuket/3073/2013 hemagglutinin trimer in complex with two KL-BHA-3D7 Fab fragments [9630 micrographs in MRC format] | Bajic GB, Civljak AC, Bonnettaz BB | 2.0 TB | 3.98 Å |
| 2026-09-03 |  |
Cryo-EM structure of a weak dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion [multiple data sets in TIFF and MRC formats] | Zuo Y, Walker K, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
5.6 TB | 4.0 Å |
| 2026-09-03 |  |
Cryo-electron tomography of functionally validated synapses in human induced neurons [multiple data sets in MRC format] | Sun RS | 164.1 GB | — |
| 2026-09-01 |  |
Cryo-EM of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3 (dataset 1) [multiple data sets in TIFF and MRC formats] | Zuo Y, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
3.2 TB | 2.37 Å |
| 2026-09-01 |  |
Cryo-EM of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3 (dataset 2) [multiple data sets in TIFF and MRC formats] | Zuo Y, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
2.0 TB | 2.81 Å |
| 2026-09-01 |  |
Single particle cryo-EM analysis of the C.albicans zincophore Pra1 in complex with zinc [multiple data sets in TIFF format] | Syrjanen JL [Pubmed: 41315346] [DOI: 10.1038/s41467-025-65782-0] |
2.0 TB | 2.5 Å |
| 2026-08-27 |  |
Single particle cryo-EM analysis of the C.albicans zincophore Pra1 in the apo-state [multiple data sets in TIFF format] | Syrjanen JL [Pubmed: 41315346] [DOI: 10.1038/s41467-025-65782-0] |
1.2 TB | 2.8 Å |
| 2026-08-26 |  |
ATP synthase from Thermus thermophilus [7150 multi-frame micrographs composed of 50 frames each in TIFF format] | Nakano A, Kishikawa JI, Yui N, Sugawara K, Kan Y, Gerle C, Shigematsu H, Mitsuoka K, Yokoyama K [Pubmed: 41105777] [DOI: 10.1126/sciadv.adx8771] |
1.4 TB | 2.7 Å |
| 2026-08-26 |  |
Experimentally-grounded benchmark datasets for cryoEM heterogeneous reconstruction methods with engineered Cas9 complexes, alternate microscope collection [multiple data sets in TIFF format] | Grassetti AV, Kinman LF, Davis JH [DOI: 10.64898/2026.05.04.721978] |
7.2 TB | — |
| 2026-08-25 |  |
Cryogenic Electron Micrographs of E. coli 50S ribosome LiCl core particle [multiple data sets in TIFF format] | Larsson DSD, Selmer M [Pubmed: 36358955] [DOI: 10.3390/biom12111605] |
7.9 TB | 2.84 - 9.4 Å |
| 2026-08-25 |  |
Visualization of membrane-stabilized SorCS2 cis interactions [multiple data sets in MRC format] | Beugelink JW, Janssen BJC [Pubmed: 42568954] [DOI: 10.1016/j.yjsbx.2026.100155] |
2.9 GB | 9.6 - 31.0 Å |
| 2026-08-24 |  |
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, left-half DNA, and right-half DNA [multiple data sets in TIFF format] | Hiraizumi M, Yamashita K, Nishimasu H [Pubmed: 42587149] [DOI: 10.1038/s41586-026-10903-y] |
3.2 TB | 2.5 - 2.6 Å |
