Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-08-07 |  |
Bovine lactoferrin single particles in water, PDB-templated for uniform orientation. [4828 multi-frame micrographs composed of 64 frames each in TIFF format] | Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T [DOI: 10.1117/12.3119418] |
1.5 TB | 3.83 Å |
| 2026-08-07 |  |
Bovine lactoferrin particles in TBS for energy landscape analysis. [8443 multi-frame micrographs composed of 64 frames each in TIFF format] | Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T [DOI: 10.1117/12.3119418] |
2.4 TB | 7.97 Å |
| 2026-08-07 |  |
FIB-SEM image volumes of dinoflagellate cells from: Symbiodinium microadriaticum, Fugacium kawagutii, Breviolum minutum, and Crypthecodinium cohnii [multiple data sets in TIFF format] | Philipp L, Weber SC | 271.3 GB | — |
| 2026-08-07 |  |
Antibody (1B2) Bound Rifamycin Synthetase Module 2 [10263 multi-frame micrographs composed of 50 frames each in MRC format] | Cogan DP | 968.5 GB | 2.94 Å |
| 2026-08-06 |  |
Iota toxin Ib D452A [4073 multi-frame micrographs composed of 52 frames each in TIFF format] | Yamada T, Nakanishi R, Sugita Y, Ninomiya Y, Noda T, Tsuge H | 933.7 GB | — |
| 2026-08-06 |  |
Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor ORG25543 [12374 multi-frame micrographs composed of 60 frames each in EER format] | Cantwell Chater RP, Cioffi CL, Vandenberg RJ, Shahsavar A [Pubmed: 41332641] [DOI: 10.1101/2025.04.21.649698] |
6.4 TB | 2.49 Å |
| 2026-08-05 |  |
CryoEM movies of Mo-nitrogenase and FeSII from Azotobacter vinelandii in presence of oxygen [multiple data sets in EER and MRC formats] | Narehood SM, Cook BD, Srisantitham S, Eng VH, Shiau AA, McGuire KL, Britt RD, Herzik Jr MA, Tezcan FA [Pubmed: 39779844] [DOI: 10.1038/s41586-024-08311-1] |
4.9 TB | 2.27 - 3.94 Å |
| 2026-08-04 |  |
Core particle assembly intermediate purified from Saccharomyces cerevisiae dataset [multiple data sets in TIFF format] | Chen X, Kaur M, Roelofs J, Walters KJ [Pubmed: 39574619] [DOI: 10.1101/2024.11.04.621988] |
3.4 TB | 2.75 - 3.55 Å |
| 2026-08-04 |  |
JMV449-NTSR1-Gi in 15 seconds following the GDP addition [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
3.3 TB | 2.85 - 3.14 Å |
| 2026-07-31 |  |
Antibody (1B2) Bound Crosslinked Rifamycin Synthetase Module 1 with a C-terminal Type II Thioesterase [7631 multi-frame micrographs composed of 50 frames each in TIFF format] | Cogan DP [Pubmed: 40631255] [DOI: 10.1101/2025.07.05.663307] |
1.3 TB | 3.96 Å |
| 2026-07-31 |  |
Raw data for cryo-electron tomograms of mitochondria in T cells from lung adenocarcinoma patients after in vitro restimulation [21 tilt series in EER format] | Su L, Pan B, Sang J, Zhang X | 147.6 GB | — |
| 2026-07-30 |  |
Antibody (1B2) Bound Rifamycin Synthetase Module 1 [10005 multi-frame micrographs composed of 50 frames each in TIFF format] | Cogan DP [Pubmed: 40631255] [DOI: 10.1101/2025.07.05.663307] |
3.1 TB | 3.22 - 3.96 Å |
| 2026-07-29 |  |
gRNAde designed RNA molecule [10689 multi-frame micrographs composed of 1134 frames each in EER format] | Spellmon NS, Haack DBH, Joshi CJ, Rudolfs BR, Hingey JH, Mancino AM, Yu ZY, Toor NT, Das RD | 4.4 TB | 2.9 Å |
| 2026-07-29 |  |
Struct2SeQ designed RNA molecule [17275 multi-frame micrographs composed of 1017 frames each in EER format] | Mancino AM, Hingey JH, He SH, Haack DBH, Rudolfs BR, Spellmon NS, Yu ZY, Toor NT, Das RD | 6.5 TB | 4.7 Å |
| 2026-07-29 |  |
MPNN-RFdiff designed RNA molecule [15834 multi-frame micrographs composed of 1116 frames each in EER format] | Hingey JH, Spellmon NS, Favor AF, Kubaney AK, Baker DB, Haack DBH, Rudolfs BR, Mancino AM, Yu ZY, Toor NT, Das RD | 6.3 TB | 4.8 Å |
| 2026-07-28 |  |
Cryo-EM micrographs of a near fully-activated intermediate A2AR-mini-Gαβγ complex [8875 multi-frame micrographs composed of 79 frames each in TIFF format] | Bi M, Wang X, Wang J, Xu J, Sun W, Adediwura VA, Miao Y, Cheng Y, Ye L [Pubmed: 39875358] [DOI: 10.1038/s41467-025-56434-4] |
2.4 TB | 2.63 - 3.36 Å |
| 2026-07-27 |  |
Cryo-ET dataset on lamellae of Dictyostelium discoideum cells acquired with various tilt-increments [multiple data sets in MRC format] | Tuijtel MW, Beck M [DOI: 10.7554/eLife.111639.1] |
707.5 GB | — |
| 2026-07-27 |  |
FIB-SEM of NF54-DiCre-PfOGREloxP parasites with OGRE KO [350 multi-frame micrographs composed of 1 frames each in TIFF format] | Dvorin JD, Navarro FM, Wagner E, Kraemer S, Gurung P | 1.2 GB | — |
| 2026-07-24 |  |
Cryo-EM raw data of the flexible TagR dimer from Pseudomonas aeruginosa [6336 multi-frame micrographs composed of 40 frames each in TIFF format] | Kolesnikov M, Prakash P, Basler M | 990.7 GB | — |
| 2026-07-24 |  |
Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex [multiple data sets in TIFF and MRC formats] | Pelea O., Fernandez Carrera J., Gerecke S. E., Chanez C., Jinek M. [Pubmed: 41642947] [DOI: 10.1126/science.adz1884] |
1.2 TB | 2.81 Å |
| 2026-07-24 |  |
Single-particle cryo-EM datasets of macroH2A-nucleosome with scFv antibodies bound [multiple data sets in TIFF format] | Tan DT | 5.6 TB | 2.9 Å |
| 2026-07-23 |  |
Single-particle cryo-EM data of GT-C O-Mannosyltransferase TMEM260 with co-purified Dol-P-Man [12967 multi-frame micrographs composed of 60 frames each in TIFF format] | CIfuente JO, Ochoa de Eribe Lizarralde B, Tascón I, López-Alonso JP, Ubarretxena-Belandia I | 6.6 TB | 2.94 Å |
| 2026-07-22 |  |
Primary cortical neurons form calcium-phosphate sheets with a bone-precursor-like ultrastructure [multiple data sets in MRC and TIFF formats] | Anderson ED, Ludtke SJ [Pubmed: 41508094] [DOI: 10.1186/s13041-025-01272-0] |
1.5 TB | — |
| 2026-07-21 |  |
Cryo electron micrographs of Arabidopsis thaliana H2A.Z-nucleosome with Arabidopsis native 147bp DNA 15.2.2 [multiple data sets in TIFF and MRCS formats] | Wang Y, Dong A [Pubmed: 40359943] [DOI: 10.1016/j.str.2025.04.015] |
1.0 TB | 2.75 - 2.93 Å |
| 2026-07-21 |  |
Cryo electron micrographs of Arabidopsis thaliana H2A-nucleosome with Arabidopsis native 147bp DNA 15.2.2 [multiple data sets in TIFF, MRC and MRCS formats] | Wang Y, Dong A [Pubmed: 40359943] [DOI: 10.1016/j.str.2025.04.015] |
638.1 GB | 3.15 - 3.28 Å |
