Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-11-24 |  |
Cryo-EM structure of the potassium-chloride cotransporter KCC4 in lipid nanodiscs [1572 multi-frame micrographs composed of 50 frames each in TIFF format] | Reid MS, Kern DM, Brohawn SG [Pubmed: 32286222] [DOI: 10.7554/eLife.52505] |
1.1 TB | 3.65 Å |
| 2020-11-24 |  |
Motion-corrected micrographs and extracted particle images of the 70S ribosome from the human pathogen Acinetobacter baumannii in complex with amikacin [multiple data sets in MRC and MRCS formats] | Nicholson D, Edwards TA, O'Neill AJ, Ranson NA [Pubmed: 32857965] [DOI: 10.1016/j.str.2020.08.004] |
177.7 GB | 2.7 - 3.0 Å |
| 2020-11-24 |  |
Motion-corrected micrographs and extracted particle images of the 70S ribosome from the human pathogen Acinetobacter baumannii in complex with tigecycline [multiple data sets in MRC and MRCS formats] | Nicholson D, Edwards TA, O'Neill AJ, Ranson NA [Pubmed: 32857965] [DOI: 10.1016/j.str.2020.08.004] |
538.5 GB | 2.5 - 3.0 Å |
| 2020-11-24 |  |
Krios G4 apoferritin test with K3/BioQuantum SerialEM BIS 3x3x1 [2391 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
659.0 GB | 1.31 Å |
| 2020-11-23 |  |
Cryo-EM of PAC1 receptor bound to PACAP38 and Gs protein [7649 multi-frame micrographs composed of 62 frames each in TIFF format] | Liang YL, Belousoff MJ, Zhao P, Koole C, Fletcher MM, Truong TT, Julita V, Christopoulos G, Xu HE, Zhang Y, Khoshouei M, Christopoulos A, Danev R, Sexton PM, Wootten D [Pubmed: 32004469] [DOI: 10.1016/j.molcel.2020.01.012] |
4.8 TB | 2.65 - 3.01 Å |
| 2020-11-23 |  |
CryoEM structure of EPYC1(106-135) peptide-bound Rubisco [13727 multi-frame micrographs composed of 60 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
5.8 TB | 2.06 Å |
| 2020-11-23 |  |
CryoEM structure of EPYC1(49-72) peptide-bound Rubisco [2500 multi-frame micrographs composed of 50 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
1.2 TB | 2.13 Å |
| 2020-11-20 |  |
CryoEM structure of Rubisco in the apo state [1834 multi-frame micrographs composed of 50 frames each in TIFF format] | He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC [Pubmed: 33230314] [DOI: 10.1038/s41477-020-00811-y] |
895.3 GB | 2.68 Å |
| 2020-11-20 |  |
Cryo-ET of actin bundles induced by full length vinculin [2 tilt series in MRC format] | Ohad Medalia OM [Pubmed: 33185186] [DOI: 10.7554/eLife.53990] |
4.0 GB | 14.2 Å |
| 2020-11-20 |  |
Architecture of a catalytically active homotrimeric plant cellulose synthase complex [multiple data sets in TIFF format] | Purushotham PP, Ho RH, Zimmer JZ [Pubmed: 32646917] [DOI: 10.1126/science.abb2978] |
3.4 TB | 3.5 Å |
| 2020-11-18 |  |
CryoEM dataset of sarkosyl-insoluble fractions from the putamen of multiple system atrophy brain of case 2 [multiple data sets in TIFF, MRC and MRCS formats] | Schweighauser M, Shi Y, Tarutani A, Kametani F, Murzin AG, Ghetti B, Matsubara T, Tomita T, Ando T, Hasegawa K, Murayama S, Yoshida M, Hasegawa M, Scheres SHW, Goedert M [Pubmed: 32461689] [DOI: 10.1038/s41586-020-2317-6] |
1.1 TB | 3.09 - 3.29 Å |
| 2020-11-18 |  |
Cryo-EM structure of mouse TRPV3 in a nanodisc [1818 multi-frame micrographs composed of 60 frames each in TIFF format] | Shimada H, Kusakizako T, Dung Nguyen TH, Nishizawa T, Hino T, Tominaga M, Nureki O [Pubmed: 32572254] [DOI: 10.1038/s41594-020-0439-z] |
2.1 TB | 3.3 Å |
| 2020-11-18 |  |
Structure and assembly of ESCRT-III helical Vps24 filaments [1320 micrographs in MRC format] | Huber ST, Mostafavi S, Mortensen SA, Sachse C [Pubmed: 32875105] [DOI: 10.1126/sciadv.aba4897] |
70.0 GB | 3.2 Å |
| 2020-11-18 |  |
SARS-CoV-2 infection in human adult lung alveolar stem cells [multiple data sets in TIFF format] | Youk J, Kim T, Evans KV, Jeong YI, Hur Y, Hong SP, Kim JH, Yi K, Kim SY, Na KJ, Bleazard T, Kim HM, Fellows M, Mahbubani KT, Saeb-Parsy K, Kim SY, Kim YT, Koh GY, Choi BS, Ju YS, Lee JH [Pubmed: 33142113] [DOI: 10.1016/j.stem.2020.10.004] |
20.8 GB | — |
| 2020-11-18 |  |
2.05 angstrom resolution structure determination of sulfur oxygenase reductase using 200kV cryo-EM [2558 multi-frame micrographs composed of 50 frames each in MRC format] | Moriya T, Adachi N, Sato Y, Arakawa T, Kawasaki M, Yamada C, Fushinobu S, Senda T [Pubmed: 32775998] [DOI: 10.1016/j.yjsbx.2020.100030] |
1.7 TB | 2.05 - 2.24 Å |
| 2020-11-13 |  |
High resolution structure of GABAAR beta3 homopentamer [multiple data sets in EER and TIFF formats] | Nakane T, Kotecha A, Sente A, McMullan G, Masiulis S, Brown PMGE, Grigoras IT, Malinauskaite L, Malinauskas T, Miehling J, Uchański T, Yu L, Karia D, Pechnikova EV, de Jong E, Keizer J, Bischoff M, McCormack J, Tiemeijer P, Hardwick SW, Chirgadze DY, Murshudov G, Aricescu AR, Scheres SHW [Pubmed: 33087931] [DOI: 10.1038/s41586-020-2829-0] |
13.0 TB | 1.7 Å |
| 2020-11-13 |  |
Single particle cryoEM of Streptococcus thermophilus SHP pheromone receptor Rgg3 in complex with SHP3 [1464 multi-frame micrographs composed of 40 frames each in MRC format] | Petrou VI, Capodagli GC, Kaelber JT, Neiditch MB [Pubmed: 32907945] [DOI: 10.1073/pnas.2008427117] |
3.0 TB | 2.95 Å |
| 2020-11-13 |  |
Cryo electron microscopy of RagAB from P. gingivalis solubilised in DDM [3635 multi-frame micrographs composed of 48 frames each in MRC format] | White JBR [Pubmed: 32393857] [DOI: 10.1038/s41564-020-0716-y] |
1.0 TB | 3.3 - 3.4 Å |
| 2020-11-11 |  |
Cryo-EM structure of immunodominant protein P1 from human pathogen Mycoplasma pneumoniae on graphene oxide grid [multiple data sets in TIFF format] | Vizarraga D, Kawamoto A, Matsumoto U, Illanes R, Pérez-Luque R, Martín J, Mazzolini R, Bierge P, Pich OQ, Espasa M, Sanfeliu I, Esperalba J, Fernández-Huerta M, Scheffer MP, Pinyol J, Frangakis AS, Lluch-Senar M, Mori S, Shibayama K, Kenri T, Kato T, Namba K, Fita I, Miyata M, Aparicio D [Pubmed: 33057023] [DOI: 10.1038/s41467-020-18777-y] |
8.0 TB | 2.9 Å |
| 2020-11-11 |  |
Single-Particle CryoEM of Influenza Hemagglutinin (HA) Trimer Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
1.2 TB | 2.9 Å |
| 2020-11-06 |  |
Serial cryoFIB/SEM reveals cytoarchitectural disruptions in Leigh syndrome patient cells [multiple data sets in TIFF format] | Zhu Y, Sun D, Schertel A, Fu X, Gwo P, Watson A, Zanetti-Domingues LC, Marisa L. Martin-Fernandez ML, Freyberg Z, Zhang P [Pubmed: 33096015] [DOI: 10.1016/j.str.2020.10.003] |
17.3 GB | — |
| 2020-10-28 |  |
The α-synuclein hereditary mutation E46K unlocks a more stable, pathogenic fibril structure [4919 multi-frame micrographs composed of 30 frames each in TIFF format] | Boyer DR, Li B, Sun C, Fan W, Zhou K, Hughes MP, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 32015135] [DOI: 10.1073/pnas.1917914117] |
897.9 GB | 2.5 Å |
| 2020-10-23 |  |
170314, Five-day-old Col-0 Arabidopsis thaliana root, phloem pole unloading zone (339-381 um from the root tip) [multiple data sets in MRC format] | Paterlini A, Belevich I, Jokitalo E, Helariutta Y [Pubmed: 31182845] [DOI: 10.1038/s41477-019-0429-5] |
43.2 GB | — |
| 2020-10-21 |  |
Movies of DPS in 260 nm gold foil holes, which eliminate specimen movement [1357 multi-frame micrographs composed of 36 frames each in MRCS format] | Naydenova K, Russo CJ [Pubmed: 33033219] [DOI: 10.1126/science.abb7927] |
1.5 TB | 1.9 Å |
| 2020-10-16 |  |
Tilt-series from cryo-lamellae of WT S. cerevisiae cells [multiple data sets in MRC format] | Allegretti M, Zimmerli CE, Rantos V, Wilfling F, Ronchi P, Fung HKH, Lee CW, Hagen W, Turoňová B, Karius K, Börmel M, Zhang X, Müller CW, Schwab Y, Mahamid J, Pfander B, Kosinski J, Beck M [Pubmed: 32879490] [DOI: 10.1038/s41586-020-2670-5] |
605.7 GB | 25.0 Å |
