Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2017-06-28 |  |
Structure of an ion channel in nano disc [multiple data sets in MRC and MRCS formats] | Jin P, Bulkley D, Guo Y, Zhang W, Guo Z, Huynh W, Wu S, Meltzer S, Cheng T, Jan LY, Jan YN, Cheng Y [Pubmed: 28658211] [DOI: 10.1038/nature22981] |
218.9 GB | 3.55 Å |
| 2017-06-01 |  |
The Structure of the Yeast Mitochondrial Ribosome [stack of 2524 particles in MRCS format] | Desai N, Brown A, Amunts A, Ramakrishnan V [Pubmed: 28154081] [DOI: 10.1126/science.aal2415] |
148.8 GB | 3.2 - 4.97 Å |
| 2017-05-24 |  |
Single Particle cryoEM Dataset of TcdA1 in prepore state (SPHIRE tutorial) [97 multi-frame micrographs composed of 24 frames each in MRCS format] | Gatsogiannis C, Roderer D, Raunser S [Pubmed: 28570515] [DOI: 10.3791/55448] |
78.1 GB | 3.5 Å |
| 2017-05-15 |  |
Untilted Single-Particle CryoEM of Highly Preferred Orientated Influenza Hemagglutinin Trimer [multiple data sets in MRC format] | Tan YZ, Lyumkis D [Pubmed: 28671674] [DOI: 10.1038/nmeth.4347] |
1.3 TB | 4.2 Å |
| 2017-03-15 |  |
Soft X-ray tomography of Plasmodium falciparum infected human erythrocytes stalled in egress by the inhibitors Compound 2 and E64 [1 Soft X-ray tomograms in MRC format] | Hale VL, Saibil HR, Duke E, Fleck RA, Blackman MJ [Pubmed: 28292906] [DOI: 10.1073/pnas.1619441114] |
294.2 MB | — |
| 2017-03-13 |  |
Bacteriophage P22 mature virion capsid protein [stack of 45150 particles in IMAGIC format] | Hryc CF, Chen D-H, Afonine PV, Jakana J, Wang Z, Haase-Pettingell C, Jiang W, Adams PD, King JA, Schmid MF, Chiu W [Pubmed: 28270620] [DOI: 10.1073/pnas.1621152114] |
171.1 GB | 3.3 Å |
| 2017-02-20 |  |
Cryo-EM structure of haemoglobin at 3.2 Å determined with the Volta phase plate [2261 multi-frame micrographs composed of 40 frames each in TIFF format] | Khoshouei M, Radjainia M, Baumeister W, Danev R [Pubmed: 28665412] [DOI: 10.1038/ncomms16099] |
254.6 GB | 3.2 Å |
| 2017-02-09 |  |
Structure of the human HCN1 hyperpolarization-activated cyclic nucleotide-gated ion channel [multiple data sets in MRC format] | Lee CH, MacKinnon R [Pubmed: 28086084] [DOI: 10.1016/j.cell.2016.12.023] |
71.4 GB | 3.5 Å |
| 2016-12-02 |  |
CryoEM Dataset of L17-Depleted 50S Ribosomal Intermediates [stack of 131899 particles in MRC format] | Davis JH, Tan YZ, Carragher B, Potter CS, Lyumkis D, Williamson JR [Pubmed: 27912064] [DOI: 10.1016/j.cell.2016.11.020] |
54.1 GB | 3.7 - 7.9 Å |
| 2016-11-24 |  |
The pathway to GTPase activation of elongation factor SelB on the ribosome [multiple data sets in MRC format] | Fischer N, Neumann P, Bock LV, Maracci C, Wang Z, Paleskava A, Konevega AL, Schroeder GF, Grubmueller H, Rodnina MV, Stark H [Pubmed: 27842381] [DOI: 10.1038/nature20560] |
1.1 TB | 3.4 - 5.3 Å |
| 2016-11-18 |  |
Focused Ion Beam-Scanning Electron Microscopy of mitochondrial reticulum in murine skeletal muscle [291 reconstructed volumes in MRC format] | Glancy B, Hartnell LM, Malide D, Yu ZX, Combs CA, Connelly PS, Subramaniam S, Balaban RS [Pubmed: 26223627] [DOI: 10.1038/nature14614] |
1.6 GB | — |
| 2016-11-11 |  |
Electron cryotomography of cryosectioned budding yeast cells [29 class averages in MRC format] | Chen C, Lim HH, Shi J, Tamura S, Maeshima M, Surana U, Gan L [Pubmed: 27605704] [DOI: 10.1091/mbc.E16-07-0506] |
134.5 GB | — |
| 2016-11-10 |  |
Structural basis for dynamic regulation of the human 26S proteasome [multiple data sets in SPIDER and MRC formats] | Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y [Pubmed: 27791164] [DOI: 10.1073/pnas.1614614113] |
2.2 TB | 3.8 - 8.0 Å |
| 2016-11-10 |  |
Volta phase plate with defocus cryo-EM dataset of Thermoplasma acidophilum 20S proteasome [427 multi-frame micrographs composed of 24 frames each in TIFF format] | Danev R, Tegunov D, Baumeister W [Pubmed: 28109158] [DOI: 10.1101/085530] |
99.4 GB | 2.2 - 2.4 Å |
| 2016-09-22 |  |
Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 Angstrom (particle images) [stack of 473827 particles in MRC format] | Nguyen TH, Galej WP, Bai XC, Oubridge C, Newman AJ, Scheres SH, Nagai K [Pubmed: 26829225] [DOI: 10.1038/nature16940] |
80.7 GB | 3.7 Å |
| 2016-09-21 |  |
Asymmetric cryo-EM reconstruction of phage MS2 reveals genome structure in situ [751 micrographs in MRC format] | Koning RI, Gomez-Blanco J, Akopjana I, Vargas J, Kazaks A, Tars K, Carazo JM, Koster AJ [Pubmed: 27561669] [DOI: 10.1038/ncomms12524] |
50.4 GB | 5.0 - 10.5 Å |
| 2016-08-18 |  |
Structure and Dynamics of Single-isoform Recombinant Neuronal Human Tubulin [304 multi-frame micrographs composed of 23 frames each in MRC format] | Vemu A, Atherton J, Spector JO, Szyk A, Moores CA, Roll-Mecak A [Pubmed: 27129203] [DOI: 10.1074/jbc.C116.731133] |
523.7 GB | 4.0 Å |
| 2016-08-15 |  |
VPP subtomogram averaging [11 class averages in MRC format] | Khoshouei M, Pfeffer S, Baumeister W, Foerster F, Danev R [Pubmed: 27235783] [DOI: 10.1016/j.jsb.2016.05.009] |
36.4 GB | 9.6 Å |
| 2016-08-03 |  |
Multiple capsid-stabilizing protein-RNA and protein-protein interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis [multiple data sets in MRC and RAW FEI formats] | Shakeel S, Westerhuis BM, Domanska A, Koning RI, Matadeen R, Koster AJ, Bakker AQ, Beaumont T, Wolthers KC, Butcher SJ [Pubmed: 27435188] [DOI: 10.1038/NCOMMS11387] |
3.7 TB | 4.3 Å |
| 2016-07-06 |  |
Unsupervised single-particle deep classification via statistical manifold learning [multiple data sets in MRC format] | Wu J, Ma YB, Congdon C, Brett B, Chen S, Xu Y, Ouyang Q, Mao Y | 30.2 GB | — |
| 2016-06-28 |  |
Designer nanoscale DNA assemblies programmed from the top down [50 micrographs in MRC format] | Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M [Pubmed: 27229143] [DOI: 10.1126/science.aaf4388] |
3.9 GB | 22.0 Å |
| 2016-06-28 |  |
Designer nanoscale DNA assemblies programmed from the top down [100 micrographs in MRC format] | Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M [Pubmed: 27229143] [DOI: 10.1126/science.aaf4388] |
7.9 GB | 25.0 Å |
| 2016-06-28 |  |
Designer nanoscale DNA assemblies programmed from the top down [177 micrographs in MRC format] | Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M [Pubmed: 27229143] [DOI: 10.1126/science.aaf4388] |
13.9 GB | 20.0 Å |
| 2016-06-20 |  |
Lambda excision HJ intermediate [stack of 66033 particles in MRC format] | Laxmikanthan G, Xu C, Brilot AF, Warren D, Steele L, Seah N, Tong W, Grigorieff N, Landy A, Van Duyne G [Pubmed: 27223329] [DOI: 10.7554/elife.14313] |
4.3 GB | 11.0 Å |
| 2016-06-17 |  |
Cryo-EM Structure of the Activated NAIP2/NLRC4 Inflammasome Reveals Nucleated Polymerization [multiple data sets in SPIDER and MRC formats] | Zhang L, Chen S, Ruan J, Wu J, Tong AB, Yin Q, Li Y, David L, Lu A, Wang WL, Marks C, Ouyang Q, Zhang X, Mao Y, Wu H [Pubmed: 26449474] [DOI: 10.1126/science.aac5789] |
1.9 TB | 4.7 - 12.5 Å |
