Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-03-18 |  |
Seeded Aβ(1-40) amyloid fibril [3018 multi-frame micrographs composed of 40 frames each in TIFF format] | Pfeiffer PB, Schmidt M, Fändrich M [Pubmed: 38158175] [DOI: 10.1016/j.jmb.2023.168422] |
590.7 GB | 2.97 Å |
| 2024-03-18 |  |
Cryo electron tomography image- and volume-series subtomograms of chloramphenicol-treated mycoplasma pneumoniae [multiple data sets in MRCS and MRC formats] | Powell B.M., Davis J.H. [Pubmed: 37398315] [DOI: 10.1101/2023.05.31.542975] |
846.7 GB | 26.0 Å |
| 2024-03-17 |  |
Cryo-EM of HCoV-NL63 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38076883] [DOI: 10.1101/2023.11.22.567964] |
6.4 TB | 8.4 - 9.0 Å |
| 2024-03-16 |  |
Single Particle Cryo Electron Microscopy Structure of the Dsl1 Complex bound to the SNAREs Sec20 and Use1 [multiple data sets in MRC format] | DAmico KD [Pubmed: 38196032] [DOI: 10.1038/s41594-023-01164-8] |
1.5 TB | 4.5 Å |
| 2024-02-29 |  |
Cryo electron microscopy of assemblies based on truncated PVY coat protein with K176C mutation [9480 multi-frame micrographs composed of 32 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
1.0 TB | 2.99 - 3.16 Å |
| 2024-02-29 |  |
Sulfolobus acidocaldarius s-layer SlaA [multiple data sets in TIFF format] | Gambelli L, McLaren MJ, Sanders K, Gaines M, Clark L, Gold VAM, Kattnig D, Sikora M, Hanus C, Isupov M, Daum B [Pubmed: 38251732] [DOI: 10.7554/eLife.84617] |
4.9 TB | 3.1 - 3.9 Å |
| 2024-02-29 |  |
cryo-EM structure of nucleotide-free rMRP2 [12785 multi-frame micrographs composed of 50 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB [Pubmed: 38438394] [DOI: 10.1038/s41467-024-46392-8] |
2.2 TB | 3.21 Å |
| 2024-02-29 |  |
cryo-EM structure of rMRP2 in complex with probenecid [13827 multi-frame micrographs composed of 40 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB | 2.1 TB | 3.45 Å |
| 2024-02-28 |  |
Apo Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1.1 TB | 2.7 Å |
| 2024-02-28 |  |
FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
930.1 GB | 2.5 Å |
| 2024-02-28 |  |
ASSFVRIa-bound Malacoceros FaNaC1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1.5 TB | 2.4 Å |
| 2024-02-28 |  |
FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs in presence of diminazene [multiple data sets in TIFF format] | Kalienkova V, Dandamudi M, Paulino C, Lynagh T [Pubmed: 38337033] [DOI: 10.1038/s41594-023-01198-y] |
1.5 TB | 3.0 Å |
| 2024-02-28 |  |
Taf15 amyloid filaments - Individual 1, frontal cortex [1980 multi-frame micrographs composed of 1407 frames each in EER format] | Tetter S, Arseni D, Murzin AG, Buhidma Y, Peak-Chew SYPC, Garringer HJ, Newell KL, Vidal R, Apostolova L, Lashley T, Ghetti B, Ryskeldi-Falcon B [Pubmed: 38057661] [DOI: 10.1038/s41586-023-06801-2] |
1.3 TB | 1.97 Å |
| 2024-02-28 |  |
Cryo-EM structure of human TFIIIC bound and unbound to tRNA gene [multiple data sets in TIFF and MRCS formats] | Seifert-Davila W, Girbig M, Hauptmann L, Hoffmann T, Eustermann S, Müller CW [Pubmed: 37418517] [DOI: 10.1126/sciadv.adh2019] |
4.1 TB | 3.2 - 3.8 Å |
| 2024-02-28 |  |
Sulfolobus acidocaldarius s-layer SlaA cryoET dataset [multiple data sets in MRC format] | Gambelli L, McLaren MJ, Sanders K, Gaines M, Clark L, Gold VAM, Kattnig D, Sikora M, Hanus C, Isupov M, Daum B [Pubmed: 38251732] [DOI: 10.7554/eLife.84617] |
1.0 TB | 11.2 Å |
| 2024-02-26 |  |
Graphene-sandwiched 20S proteasome [50 multi-frame micrographs composed of 32 frames each in MRCS format] | Liu N, Xu J, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
31.0 GB | 2.6 Å |
| 2024-02-19 |  |
Mouse heavy chain apoferritin in vitreous ice after laser-melting and revitrification [10421 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
2.7 TB | 1.59 Å |
| 2024-02-19 |  |
Graphene-sandwiched apoferritin [55 multi-frame micrographs composed of 32 frames each in TIFF format] | Liu N, Xu J, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
21.7 GB | 3.1 Å |
| 2024-02-16 |  |
Cryo-EM reconstruction of the influenza A virus helical ribonucleoprotein-like [26515 multi-frame micrographs composed of 40 frames each in TIFF format] | Chenavier F, Ruigrok RWH, Schoehn G, Ballandras-Colas A, Crépin T [Pubmed: 38100595] [DOI: 10.1126/sciadv.adj9974] |
10.4 TB | 5.3 - 8.7 Å |
| 2024-02-16 |  |
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a dimeric form [13094 multi-frame micrographs composed of 75 frames each in TIFF format] | Wang FW [Pubmed: 37040767] [DOI: 10.1016/j.str.2023.03.010] |
7.7 TB | 2.66 - 2.8 Å |
| 2024-02-15 |  |
FIB-SEM dataset of a human bone osteosarcoma epithelial cell (U2-OS) [1168 micrographs in TIFF format] | Belevich I, Schertel A, Zaversek T, Szyrynska N, Saarnio S, Jokitalo E [Pubmed: 38609529] [DOI: 10.1038/s41556-024-01381-3] |
5.6 GB | — |
| 2024-02-15 |  |
FIB-SEM dataset showing localization of a Golgi matrix protein GM130 in human hepatocellular carcinoma cell (Huh-7) [564 reconstructed volumes in TIFF format] | Belevich I, Jokitalo E | 1.2 GB | — |
| 2024-02-13 |  |
5-HT2AR bound to a novel agonist in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM) [7573 multi-frame micrographs composed of 50 frames each in TIFF format] | Barros-Alvarez X, Kim K, Panova O, Roth BL, Skiniotis G [Pubmed: 36171289] [DOI: 10.1038/s41586-022-05258-z] |
3.7 TB | 3.45 Å |
| 2024-02-13 |  |
Cryo-EM structure of the chain-elongating E3 ubiquitin ligase UBR5 [multiple data sets in MRC format] | Hodáková Z, Grishkovskaya I, Haselbach D, Kotisch H [Pubmed: 37409633] [DOI: 10.15252/embj.2022113348] |
2.3 TB | 3.0 Å |
| 2024-02-13 |  |
Cryo electron microscopy of Virus-like Particle based on PVY coat protein [502 multi-frame micrographs composed of 40 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
407.3 GB | 2.99 - 3.34 Å |
