오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2025-07-30 | CryoEM structure of a synthetic antibody, COP-2, in complex with the C-terminal domain of Clostridium perfringens Enterotoxin [12415 micrographs in MRC format] | Ogbu CP, Goldbach NM, Pacesa M, Kapoor S, Correia BE, Vecchio AJ | 775.9 GB | 2.95 Å | |
2025-07-30 | SpCas9 with computationally designed SpCas9_b10 binder [13575 multi-frame micrographs composed of 40 frames each in MRC format] | Pacesa M, Nickel L, Correia BE [Pubmed: 39677777] [DOI: 10.1101/2024.09.30.615802] |
5.1 TB | 3.33 Å | |
2025-07-30 | 70S initiation complex (tRNA-fMet M1 + AUG start codon) [2267 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
629.3 GB | 2.75 Å | |
2025-07-30 | 70S initiation complex (tRNA-fMet M1 + GUG start codon) [2440 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
705.7 GB | 2.61 Å | |
2025-07-30 | 70S initiation complex (tRNA-fMet M1 + UUG start codon) [2441 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
705.9 GB | 2.59 Å | |
2025-07-30 | 70S initiation complex (tRNA-fMet M1 + CUG start codon) [3155 multi-frame micrographs composed of 48 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
941.0 GB | 2.63 Å | |
2025-07-30 | 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon) [4216 multi-frame micrographs composed of 29 frames each in TIFF format] | Mattingly JM, Nguyen HA, Roy B, Fredrick K, Dunham CM [Pubmed: 39222680] [DOI: 10.1016/j.jbc.2024.107743] |
3.0 TB | 2.6 Å | |
2025-07-30 | Turnip Crinkle Virus: virions (TCV-M) [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 273.2 GB | 3.43 Å | |
2025-07-30 | Turnip Crinkle Virus: virus-like particles (TCV-P38) [multiple data sets in MRC and TIFF formats] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G | 2.8 TB | 3.47 Å | |
2025-07-30 | Satellite Tobacco Necrosis Virus-1 [multiple data sets in TIFF format] | Saunders K, Shah S, Peyret H, Meshcheriakova Y, Richardson J, Eltschkner S, Lawson DM, Lomonossoff G [Pubmed: 40706701] [DOI: 10.1016/j.jmb.2025.169352] |
512.5 GB | 2.77 Å | |
2025-07-26 | Raw .tiff images of Panx1 lacking c-terminal activating domain stack 1 [4267 multi-frame micrographs composed of 50 frames each in TIFF format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
2.3 TB | 2.9 Å | |
2025-07-26 | In situ cryo-ET visualization of mitochondrial depolarization and mitophagic engulfment [multiple data sets in TIFF and EER formats] | Herrmann EH [DOI: 10.1101/2025.03.24.645001] |
766.8 GB | 21.0 Å | |
2025-07-25 | Cryo-EM structure of E. coli cellulose synthase subunit C with cellotetraose [8674 multi-frame micrographs composed of 40 frames each in TIFF format] | Verma P, Zimmer J [Pubmed: 39242554] [DOI: 10.1038/s41467-024-51838-0] |
2.3 TB | 3.8 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the revitrified T20S proteasome [6105 multi-frame micrographs composed of 47 frames each in TIFF format] | Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
920.8 GB | 2.5 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the conventional T20S proteasome [3479 multi-frame micrographs composed of 50 frames each in TIFF format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
589.6 GB | 2.6 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the deposited and revitrified T20S proteasome [3641 multi-frame micrographs composed of 50 frames each in TIFF format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
555.0 GB | 2.8 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the conventional 50S ribosomal subunit [11121 multi-frame micrographs composed of 693 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
3.1 TB | 3.5 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the revitrified 50S ribosomal subunit [6174 multi-frame micrographs composed of 693 frames each in EER format] | Straub MS, Hruby J, Drabbels M, Lorenz UJ | 2.7 TB | — | |
2025-07-25 | Single Particle cryo-EM dataset of the deposited and revitrified 50S ribosomal subunit [9532 multi-frame micrographs composed of 693 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
2.5 TB | 3.4 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the shaped pulse revitrified 50S ribosomal subunit [7725 multi-frame micrographs composed of 45 frames each in TIFF format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
1.1 TB | 2.9 Å | |
2025-07-25 | Single Particle cryo-EM dataset of the revitrified HIV-1 envelope protein [10528 multi-frame micrographs composed of 1287 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
5.9 TB | 3.8 Å | |
2025-07-25 | Single Particle cryo-EM dataset of conventional Hemagglutinin [2251 multi-frame micrographs composed of 1179 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
768.8 GB | 2.9 Å | |
2025-07-25 | Single Particle cryo-EM dataset of revitrified Hemagglutinin [6476 multi-frame micrographs composed of 630 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
2.9 TB | 2.8 Å | |
2025-07-25 | Single Particle cryo-EM dataset of deposited and revitrified Hemagglutinin [10114 multi-frame micrographs composed of 621 frames each in EER format] | Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ [Pubmed: 39605560] [DOI: 10.1101/2024.11.21.624652] |
2.5 TB | 3.0 Å | |
2025-07-25 | Dynamic fibrillar assembly of αB-crystallin induced by perturbation of the conserved NT-IXI motif resolved by cryo-EM [10654 multi-frame micrographs composed of 45 frames each in TIFF format] | McFarland RM, Reichow SR, Noroozi RN, Miller AM [Pubmed: 39609421] [DOI: 10.1038/s41467-024-54647-7] |
4.2 TB | 3.4 Å |