Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2019-11-19 |  |
Cryo-electron microscopy structure of the P-Rex1–G-beta-gamma signaling scaffold [multiple data sets in TIFF, MRC and MRCS formats] | Cash JN, Urata S, Li S, Ravala SK, Avramova LV, Shost MD, Gutkind JS, Tesmer JJG, Cianfrocco MA [Pubmed: 31663027] [DOI: 10.1126/sciadv.aax8855] |
3.0 TB | 3.2 Å |
| 2019-11-18 |  |
cryo-ET of cryo-FIB milled yeast cell in which scs2/22 ist2 are deleted [multiple data sets in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
12.8 GB | — |
| 2019-11-18 |  |
cryo-ET of cryo-FIB milled yeast cell in which scs2/22 ist2 are deleted with high intracellular calcium [121 tilt series in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
14.3 GB | — |
| 2019-11-18 |  |
cryo-ET of cryo-FIB milled yeast cell, in which Tcb3-GFP is overexpressed and scs2/22 ist2 tcb1/2 are deleted [117 tilt series in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
3.1 GB | — |
| 2019-11-15 |  |
Cryo-EM structure of the adenosine A2A receptor coupled to an engineered heterotrimeric G protein [multiple data sets in TIFF and MRCS formats] | Garcia-Nafria J, Lee Y, Bai X, Carpenter B, Tate CG [Pubmed: 29726815] [DOI: 10.7554/eLife.35946] |
1.1 TB | 4.11 Å |
| 2019-11-11 |  |
Structure of the green algal photosystem I supercomplex with a decameric light-harvesting complex I. [10989 multi-frame micrographs composed of 33 frames each in TIFF format] | Suga M, Ozawa S, Yoshida-Motomura K, Akita F, Miyazaki N, Takahashi Y [Pubmed: 31182847] [DOI: 10.1038/s41477-019-0438-4] |
8.0 TB | 2.8 - 2.9 Å |
| 2019-11-07 |  |
Cryo-EM structure of calcium-bound TMEM16F in nanodisc with supplement of PIP2 [stack of 3823 particles in MRCS format] | Feng S, Jan LY, Cheng Y [Pubmed: 31291589] [DOI: 10.1016/j.celrep.2019.06.023] |
576.6 GB | 3.2 - 3.3 Å |
| 2019-11-06 |  |
Cryo-EM dataset, containing multiple conformations of a heterodimeric ABC exporter TmrAB (EQ-mutant), incubated with a mixture of ATP and ADP [multiple data sets in MRC and MRCS formats] | Januliene D, Hofmann S, Mehdipour AR, Thomas C, Hummer G, Tampé R, Moeller A [Pubmed: 31316210] [DOI: 10.1038/s41586-019-1391-0] |
7.1 TB | 2.8 - 2.9 Å |
| 2019-10-30 |  |
Cryo-EM structure of the translocator of the outer mitochondrial membrane [2057 multi-frame micrographs composed of 49 frames each in TIFF format] | Araiso Y, Tsutsumi A, Qiu J, Imai K, Shiota T, Song J, Lindau C, Wenz LS, Sakaue H, Yunoki K, Kawano S, Suzuki J, Wischnewski M, Schutze C, Ariyama H, Ando T, Becker T, Lithgow T, Wiedemann N, Pfanner N, Kikkawa M, Endo T [Pubmed: 31600774] [DOI: 10.1038/s41586-019-1680-7] |
1.9 TB | 3.81 Å |
| 2019-10-17 |  |
Cryo electron microscopy of TssA protein from T6SS of Vibrio cholerae. [multiple data sets in MRC and MRCS formats] | Nazarov S, Adaixo R, Basler M [Pubmed: 31403721] [DOI: 10.15252/embj.2018100825] |
1.3 TB | 3.9 Å |
| 2019-10-14 |  |
PolyA polymerase module of the cleavage and polyadenylation factor (CPF) from Saccharomyces cerevisiae [multiple data sets in MRCS format] | Casanal A, Kumar A, Hill CH, Emsley P, Passmore LA [Pubmed: 29074584] [DOI: 10.1126/science.aao6535] |
15.4 TB | 3.55 Å |
| 2019-10-09 |  |
Single particle cryo-EM dataset of the triskelion hub subparticle extraction from clathrin cages [multiple data sets in MRCS format] | Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ [Pubmed: 31582853] [DOI: 10.1038/s41594-019-0292-0] |
88.4 GB | 4.69 - 7.79 Å |
| 2019-10-07 |  |
Cryo-EM structure of the serotonin 5-HT1B receptor coupled to heterotrimeric Go [multiple data sets in TIFF and MRCS formats] | Garcia-Nafria J, Nehme R, Edwards PC, Tate CG [Pubmed: 29925951] [DOI: 10.1038/s41586-018-0241-9] |
8.0 TB | 3.78 Å |
| 2019-10-07 |  |
Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
898.1 MB | — |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [4529 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
605.2 GB | — |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [4490 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
273.8 GB | — |
| 2019-10-07 |  |
Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
583.8 MB | — |
| 2019-10-04 |  |
Single particle cryo-EM dataset of clathrin cages with phase flipping suitable for refinement [stack of 12785 particles in MRCS format] | Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ [Pubmed: 31582853] [DOI: 10.1038/s41594-019-0292-0] |
11.9 GB | 9.07 - 23.68 Å |
| 2019-10-04 |  |
Single particle cryo-EM dataset of clathrin cages suitable for subparticle extraction [multiple data sets in MRCS format] | Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ [Pubmed: 31582853] [DOI: 10.1038/s41594-019-0292-0] |
19.9 GB | 9.07 - 23.68 Å |
| 2019-09-30 |  |
Human pre-B spliceosome and U4/U6.U5 tri-snRNP [multiple data sets in MRC and MRCS formats] | Charenton C, Wilkinson ME, Nagai K [Pubmed: 30975767] [DOI: 10.1126/science.aax3289] |
2.3 TB | 2.9 - 28.0 Å |
| 2019-09-27 |  |
Cryo-EM structure of TMV in water [62 multi-frame micrographs composed of 20 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
6.8 GB | 1.9 Å |
| 2019-09-27 |  |
Cryo-EM structure of TMV with Ca2+ at low pH [197 multi-frame micrographs composed of 40 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
22.0 GB | 2.0 Å |
| 2019-08-30 |  |
Cryo-EM structures of human P4-ATPase flippase [multiple data sets in TIFF format] | Hiraizumi M, Yamashita K, Nishizawa T, Nureki O [Pubmed: 31416931] [DOI: 10.1126/science.aay3353] |
11.0 TB | 2.63 - 3.42 Å |
| 2019-08-28 |  |
Improved applicability and robustness of fast cryo-electron tomography data acquisition [12 tilt series in MRC format] | Eisenstein F, Danev R, Pilhofer M [Pubmed: 31425790] [DOI: 10.1016/j.jsb.2019.08.006] |
21.6 GB | 9.0 Å |
| 2019-08-27 |  |
Yeast postcatalytic spliceosome, two cryoEM data sets at different magnifications [multiple data sets in MRC format] | Wilkinson ME, Nagai K [Pubmed: 31478901] [DOI: 10.1107/S2059798319010519] |
6.3 TB | 3.3 Å |
