Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-01-07 |  |
Cryo-electron tomography of rod outer segments in ABCA4 knockout mice acquired with Volta phase plate in focus [2 reconstructed volumes in MRC format] | Poege M, Mahamid J, Imanishi SS, Plitzko JM, Palczewski K, Baumeister W [Pubmed: 34931611] [DOI: 10.7554/eLife.72817] |
3.0 GB | 29.1 Å |
| 2022-01-07 |  |
Cryo-electron tomography of rod outer segments in wild type mice acquired with Volta Phase Plate in focus [2 reconstructed volumes in MRC format] | Poege M, Mahamid J, Imanishi SS, Plitzko JM, Palczewski K, Baumeister W [Pubmed: 34931611] [DOI: 10.7554/eLife.72817] |
3.0 GB | 24.3 Å |
| 2022-01-07 |  |
Cryo-electron tomography of rod outer segments in wild type mice acquired conventionally with defocus [2 reconstructed volumes in MRC format] | Poege M, Mahamid J, Imanishi SS, Plitzko JM, Palczewski K, Baumeister W [Pubmed: 34931611] [DOI: 10.7554/eLife.72817] |
4.1 GB | 19.3 Å |
| 2021-12-23 |  |
cryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134 [4506 multi-frame micrographs composed of 60 frames each in TIFF format] | Cao C, Fay J, Roth B [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
1.3 TB | 2.6 Å |
| 2021-12-23 |  |
cryoEM structure of Gq-coupled MRGPRX2 with peptide agonist Cortistatin-14 [12299 multi-frame micrographs composed of 60 frames each in TIFF format] | Cao C, Fay J, Roth B [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
3.6 TB | 2.45 Å |
| 2021-12-23 |  |
cryoEM structure of Gq-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573 [5359 multi-frame micrographs composed of 60 frames each in TIFF format] | Cao C, Fay J, Roth B [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
1.6 TB | 2.9 Å |
| 2021-12-23 |  |
cryoEM structure of Gi-coupled MRGPRX2 with peptide agonist Cortistatin-14 [9765 multi-frame micrographs composed of 60 frames each in TIFF format] | Cao C, Fay J, Roth B [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
2.8 TB | 2.54 Å |
| 2021-12-23 |  |
Rabbit Muscle Aldolase 20% glycerol, 200kV [741 multi-frame micrographs composed of 96 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
282.6 GB | 3.3 Å |
| 2021-12-17 |  |
Cryo electron tomograms of mouse DRG axons (dataset 1) [multiple data sets in MRC format] | Foster HE, Ventura Santos C, Carter AP [Pubmed: 34878519] [DOI: 10.1083/jcb.202103154] |
200.8 GB | — |
| 2021-12-17 |  |
cryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme bound to the Mtb WhiB7 promoter [5080 multi-frame micrographs composed of 50 frames each in TIFF format] | Lilic M, Darst SA, Campbell EA [Pubmed: 34171296] [DOI: 10.1016/j.molcel.2021.05.017] |
1.2 TB | 2.74 Å |
| 2021-12-16 |  |
cryoEM structure of Gi-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573 [5759 multi-frame micrographs composed of 60 frames each in TIFF format] | Can Cao CC, Jonathan Fay JF, Bryan Roth BR [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
1.7 TB | 2.58 Å |
| 2021-12-14 |  |
Identifying long-range synaptic inputs using genetically encoded labels and volume electron microscopy [6 multi-frame micrographs composed of 1 frames each in TIFF format] | Ayuso-Jimeno IP, Ronchi P, Wang T, Gallori CE, Gross CT [Pubmed: 35715545] [DOI: 10.1038/s41598-022-14309-4] |
68.7 GB | — |
| 2021-12-03 |  |
Cryo electron tomograms of mouse DRG axons (dataset 2) [multiple data sets in TIFF and MRC formats] | Foster HE, Ventura Santos C, Carter AP [Pubmed: 34878519] [DOI: 10.1083/jcb.202103154] |
206.2 GB | 12.0 - 32.0 Å |
| 2021-11-30 |  |
Cryo-EM dataset of the substrate-engaged human 26S proteasome [44688 micrographs in MRC format] | Dong Y, Zhang S, Wu Z, Wang WL, Mao Y [Pubmed: 30479383] [DOI: 10.1038/s41586-018-0736-4] |
13.9 TB | 2.8 - 3.6 Å |
| 2021-11-30 |  |
Entropy Regularized Deconvolution of Cellular Cryo-Transmission Electron Tomograms [3 tilt series in MRC format] | Croxford MW, Elbaum ME, Arigovindan M, Kam Z, Agard DA, Villa E, Sedat J [Pubmed: 34876518] [DOI: 10.1073/pnas.2108738118] |
6.4 GB | — |
| 2021-11-30 |  |
Entropy Regularized Deconvolution of Cellular Cryo-Transmission Electron Tomograms [2 tilt series in MRC format] | Croxford MW, Elbaum ME, Arigovindan M, Kam Z, Agard DA, Villa E, Sedat J [Pubmed: 34876518] [DOI: 10.1073/pnas.2108738118] |
5.2 GB | — |
| 2021-11-30 |  |
E. coli MsbA in DDM in complex with G247 [3485 micrographs in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
307.0 GB | 3.55 Å |
| 2021-11-30 |  |
Rabbit Muscle Aldolase 20% glycerol, 300kV [2608 multi-frame micrographs composed of 50 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
580.1 GB | 4.6 Å |
| 2021-11-29 |  |
Cryo electron microscopy of recombinant, un-seeded hIAPP fibrils [6089 multi-frame micrographs composed of 30 frames each in MRC format] | Cao Q, Boyer DR, Sawaya MR, Ge P, Eisenberg DS [Pubmed: 32541896] [DOI: 10.1038/s41594-020-0435-3] |
1.9 TB | 3.4 Å |
| 2021-11-26 |  |
Cryo-EM reconstruction of heavy chain mouse apoferritin, 8 datasets testing dose rate and correlative double sampling mode for the Gatan K3 direct electron detector. [1143 multi-frame micrographs composed of 120 frames in LZW compressed TIFF format [multiple data sets in TIFF format] | Sun M, Azumaya CM, Tse E, Bulkley DP, Harrington MB, Gilbert G, Frost A, Southworth D, Verba KA, Cheng Y, Agard DA [Pubmed: 33984504] [DOI: 10.1016/j.jsb.2021.107745] |
8.5 TB | 1.655 Å |
| 2021-11-26 |  |
Higher-order structures of the foot-and-mouth disease virus RNA-dependent RNA polymerase required for dynamic inter-molecular interactions involved in viral genome replication [5417 multi-frame micrographs composed of 79 frames each in MRC format] | Loundras EA, Streetley J, Herod MR, Thompson RF, Harris M, Bhella D, Stonehouse NJ [Pubmed: 35039618] [DOI: 10.1038/s42003-021-02989-z] |
8.1 TB | 7.3 Å |
| 2021-11-26 |  |
Cryo-electron microscopy reconstruction of ATP-bound ABCA4 (E1087Q/E2096Q) [9070 multi-frame micrographs composed of 50 frames each in TIFF format] | Liu F, Lee J, Chen J [Pubmed: 33605212] [DOI: 10.7554/eLife.63524] |
3.7 TB | 3.27 Å |
| 2021-11-26 |  |
Cryo-electron microscopy reconstruction of human TAP Transporter bound to Herpes Simplex Virus 1 Inhibitor ICP47 [3875 multi-frame micrographs composed of 50 frames each in TIFF format] | Oldham ML, Grigorieff N, Chen J [Pubmed: 27935481] [DOI: 10.7554/eLife.21829] |
1.5 TB | 3.97 Å |
| 2021-11-26 |  |
Cryo-electron microscopy reconstruction of PCAT1 bound to its CtA peptide substrate [3879 multi-frame micrographs composed of 50 frames each in MRC format] | Kieuvongngam V, Olinares PDB, Palillo A, Oldham ML, Chait BT, Chen J [Pubmed: 31934861] [DOI: 10.7554/eLife.51492] |
1.8 TB | 3.35 Å |
| 2021-11-26 |  |
Reconstructed cryo soft X-ray tomography dataset of a treated NIH-3T3 cell with corresponding correlated cryo-3D-SIM channels [300 reconstructed volumes in TIFF format] | Groen J, Pereiro E [Pubmed: 34909150] [DOI: 10.1039/d1sc04183e] |
10.1 GB | — |
