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EMPIAR-13483
ATP synthase from Thermus thermophilus [7150 multi-frame micrographs composed of 50 frames each in TIFF format]
Publication:

Structures of rotary ATP synthase from <i>Thermus thermophilus</i> during proton powered ATP synthesis

Nakano A, Kishikawa JI, Yui N, Sugawara K, Kan Y, Gerle C, Shigematsu H, Mitsuoka K, Yokoyama K

Science advances 11 (2025)

PMID: 41105777

Related EMDB entry:
EMD-63905
Deposited:
2026-03-06
Released:
2026-08-26
Last modified:
2026-08-26
Imageset size:
1.37 TB
Imageset DOI:
10.6019/EMPIAR-13483
Experimental metadata:
Download xml json
Deposited via PDBj
Contains:
  • micrographs - multiframe
Image Sets
1. Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state1
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
7150
Image size:
(4092, 5760)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(0.752, 0.752)
Details:
- Microscope: JEOL CryoARM300
- Acceleration voltage (kV): 300
- Spherical aberration (Cs): 2.7
- Nominal Defocus (nm): -1400 to -1600
- Detector: Gatan K3 BIOQUANTUM
- Average electron dose per image (e-/A2): 50
- Dose per frame: 1 electron/A^2/frame
Files:
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Citations
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Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)
A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.
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CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.
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prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.
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CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.
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Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.
Jones HN, Deshmukh A, Pande K. (2026)
Dual site targeting of the bacterial 70S ribosome by tetracyclines.
Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)
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