Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-09-25 |  |
cryoCLEM-guided cryoET of adult brain Psd95-containing synapses ('ultra fresh' preparation and brain tissue cryo-section tomograms) [multiple data sets in MRC format] | Peukes J, Lovatt C, Leistner C, Boulanger J, Morado DR, Fuller MJG, Kukulski W, Zhu F, Komiyama NH, Briggs JAG, Grant SGN, Frank RAW [DOI: 10.7554/eLife.100335.1] |
475.6 GB | — |
| 2025-09-22 |  |
Cryo-electron tomography of pyrenoid Rubisco of Chlamydomonas reinhardtii [multiple data sets in MRC format] | Hou Z, Dumoux M, Elad N, Zhang PJ [Pubmed: 40835820] [DOI: 10.1038/s41467-025-62998-y] |
111.1 GB | 8.1 Å |
| 2025-09-20 |  |
Micrographs that led to the structures of INF2 on F-actin [multiple data sets in TIFF format] | Palmer NJ, Barrie KR, Dominguez R [Pubmed: 38843827] [DOI: 10.1038/s41586-024-07637-0] |
48.2 TB | 2.86 - 4.38 Å |
| 2025-09-17 |  |
CryoEM movies of the human mortalin(R126W)-GrpEL1(WT) complex [multiple data sets in EER format] | Morizono MA, Herzik Jr MA [Pubmed: 39737924] [DOI: 10.1038/s41467-024-54499-1] |
5.1 TB | 2.96 Å |
| 2025-09-17 |  |
CryoEM movies of the human mortalin(R126W)-GrpEL1(Y173A) complex [multiple data sets in EER format] | Morizono MA, Herzik Jr MA [Pubmed: 39737924] [DOI: 10.1038/s41467-024-54499-1] |
2.7 TB | 3.38 Å |
| 2025-09-16 |  |
Rapid Hepatitis C Virus Replication Machinery Removal After Antiviral 1 Treatment with DAA Monitored By Multimodal Imaging [300 reconstructed volumes in TIFF format] | Castro V, Calvo G, Perez-Berna AJ, Mamprin K, Kapishnikov S, Rogers D, O'Connor S, Sheridan P, Fahy K, Pereiro E, Gastaminza P [Pubmed: 40553718] [DOI: 10.1016/j.str.2025.05.015] |
3.6 GB | — |
| 2025-09-15 |  |
Serial Block Face - Scanning Electron Microscopy of brain microvessels with/without P. falciparum egress products [multiple data sets in TIFF format] | Long RKML, Ronchi PR, Bernabeu MB [DOI: 10.1101/2024.03.29.587334] |
2.5 GB | — |
| 2025-09-11 |  |
In-cell structure and snapshots of copia retrotransposons in intact tissue by cryo-electron tomography [1 tilt series in EER format] | Klumpe S, Beck F, Plitzko JM [Pubmed: 40049165] [DOI: 10.1016/j.cell.2025.02.003] |
23.0 GB | 7.7 Å |
| 2025-09-11 |  |
Single particle structure of mCELSR1 extracellular region containing CADH9-GAIN domains [11377 multi-frame micrographs composed of 50 frames each in TIFF format] | Bandekar SJ, Arac D [Pubmed: 40295529] [DOI: 10.1038/s41467-025-59319-8] |
6.6 TB | 4.3 Å |
| 2025-09-09 |  |
Agonist-free BmGR9 [12024 multi-frame micrographs composed of 68 frames each in TIFF format] | Frank HM, Walujkar S, Walsh Jr RM, Laursen WJ, Theobald DL, Garrity PA, Gaudet R [Pubmed: 38573859] [DOI: 10.1016/j.celrep.2024.114035] |
4.8 TB | 2.85 Å |
| 2025-09-09 |  |
Human polymerase epsilon bound to PCNA and DNA with a pre-existing mismatch in the blocked conformation [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 40440070] [DOI: 10.1073/pnas.2507232122] |
11.8 TB | 3.81 - 3.88 Å |
| 2025-09-05 |  |
High-resolution snapshots of talin auto-inhibitory states [12573 multi-frame micrographs composed of 40 frames each in TIFF format] | Izard T, Rangarajan ES [Pubmed: 39468080] [DOI: 10.1038/s41467-024-52581-2] |
3.9 TB | 2.7 - 3.4 Å |
| 2025-09-05 |  |
Benchmark TEM data of mouse brain previously imaged by Nikon confocal microscopy [1 micrographs in TIFF format] | Konishi KK, Neves GN, Russell MR, Burrone JB, Fleck RF [DOI: 10.1111/jmi.13436] |
2.7 GB | — |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-S2808D [10067 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
2.5 TB | 2.98 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-S2808D in the presence of H2O2/NOC-12/GSH [13908 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
3.4 TB | 3.64 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-S2808D in the presence of Rapamycin [18491 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
4.5 TB | 3.96 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420Q [13276 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
3.3 TB | 2.86 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W [7420 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.8 TB | 3.13 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W with calcium [7490 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.8 TB | 3.29 - 3.52 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W with ARM210 [6488 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.5 TB | 3.08 Å |
| 2025-09-05 |  |
Cryo electron micrographs of RyR2-R420W with calcium and calmodulin [10334 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
2.5 TB | 3.12 - 3.56 Å |
| 2025-09-04 |  |
Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2H-nucleosome complex without crosslinking [9443 multi-frame micrographs composed of 113 frames each in TIFF format] | Chio US, Palovcak E, Autzen AAA, Autzen HE, Muñoz E, Yu Z, Wang F, Agard DA, Armache J-P, Narlikar GJ, Cheng Y [Pubmed: 38472177] [DOI: 10.1038/s41467-024-46178-y] |
7.9 TB | 2.3 - 3.2 Å |
| 2025-09-04 |  |
Structure of the C-terminal protease CtpA-LbcA complex of Pseudomonas aeruginosa [26257 multi-frame micrographs composed of 75 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38467832] [DOI: 10.1038/s44318-024-00069-6] |
16.6 TB | 3.55 - 4.14 Å |
| 2025-09-04 |  |
TadA with ADP [24810 multi-frame micrographs composed of 40 frames each in TIFF format] | Hohl M, Low HH [Pubmed: 39103374] [DOI: 10.1038/s41467-024-50280-6] |
4.3 TB | 3.1 Å |
| 2025-09-04 |  |
Cryo-ET of D. melanogaster Nup358::VN/Nup358::VC cells [multiple data sets in MRC format] | Sachweh J, Beck M [Pubmed: 40829587] [DOI: 10.1016/j.cell.2025.07.025] |
330.6 GB | 31.1 - 69.0 Å |
