EMPIAR-12204 - Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB [multiple data sets in TIFF format]

EMPIAR-12204

Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB [multiple data sets in TIFF format]

Publication:

to be published

Soma T

(---)

Related EMDB entry:

EMD-60892 EMD-60891 EMD-60888 EMD-60890 EMD-60889 EMD-60887 EMD-60895 EMD-60893 EMD-60894 EMD-60896

Deposited:

2024-07-24

Released:

2026-03-09

Last modified:

2026-03-09

Imageset size:

5.40 TB

Imageset DOI:

10.6019/EMPIAR-12204

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. GT/TT CDN

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6568

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.83, 0.83)

Details:

gain: data/gt_tt/data/GridSquare_2194713/Data/FoilHole_2196522_Data_2198057_2198059_20230203_185913_gain.tiff

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2. CA/CA CDN normal

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

9738

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.83, 0.83)

Details:

gain: data/ca_ca_normal/data_1/GridSquare_8563335/Data/FoilHole_8567246_Data_8565306_8565308_20230409_125934_gain.tiff

Files:

Archives and downloads the selected files into an uncompressed zip file.

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3. CA/CA CDN CDS

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

8584

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.83, 0.83)

Details:

gain: data/ca_ca_cds/data_3/GridSquare_29476221/Data/FoilHole_29477679_Data_29476640_29476642_20230430_011037_gain.tiff
the correlated double sampling (CDS) mode was used

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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He L, Bartesaghi A. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)