EMPIAR-10015 - Yeast 80S Ribosome-Taura Syndrome Virus IRES complex, Frealign Input Particle Stack [stack of 416312 particles in MRC format]

EMPIAR-10015

Yeast 80S Ribosome-Taura Syndrome Virus IRES complex, Frealign Input Particle Stack [stack of 416312 particles in MRC format]

Publication:

Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center.

Koh CS, Brilot AF, Grigorieff N, Korostelev AA

Pnas 111 (2014) 9139-9144

PMID: 24927574

DOI: doi:10.1073/pnas.1406335111

Related EMDB entry:

EMD-5943 EMD-5942

Deposited:

2014-05-30

Released:

2014-11-06

Last modified:

2014-11-06

Imageset size:

273.58 GB

Imageset DOI:

10.6019/EMPIAR-10015

Experimental metadata:

Download xml json

Version history:

2015-10-28

REL

Restructured the entry directory to have "data" and ".private".

Contains:

picked particles - multiframe - processed

Image Sets

1. Frealign input particle stack

Category:

picked particles - multiframe - processed

Image format:

MRC

No. of images or tilt series:

416312

Image size:

(420, 420)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.0595, 1.0595)

Details:

Processing of raw images: Normalized in Imagic (normvar, whole image average=0, sigma=10)

Files:

Archives and downloads the selected files into an uncompressed zip file.

Depending on the number and size of files to be downloaded, this can take an enormous amount of time. Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

Quick Links

Browse EMPIAR

Sample Preparation Widget

Volume Browser

Tomo Viewer Prototype

Claim entries to your ORCiD

Talks and Tutorials

EMPIAR Quick tour

Publications

Re-use study

Statistics

EMPIAR in the news

COVID-19 Data Portal

EMDB

BioImage Archive

PDBe

EMNavigator@PDBj

PDBj

Citations

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)