EMPIAR-11113
Integration of an event-driven Timepix3 hydrid pixel detector into a cryo-EM workflow [multiple data sets in MRCS and TPX3 formats]
Publication:

Integration of an event-driven Timepix3 hydrid pixel detector into a cryo-EM workflow

van Schayck JP, Zhang Y, Knoops K, Peters PJ, Ravelli RBG

Microscopy & Microanalysis (---)

Related EMDB entry:
Deposited:
2022-06-09
Released:
2023-01-30
Last modified:
2023-02-01
Imageset size:
2.93 TB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
  • micrographs - single frame
1. Processed but unaligned Timepix3 data. Processed with CNN-ToT event localisation, chip edge correction, deterministic blur (sigma=0.5) and stored at two times super resolution and gain corrected.
Category:
micrographs - multiframe
Image format:
MRCS
No. of images or tilt series:
2980
Image size:
(1032, 1032)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(0.6, 0.6)
Details:
Processed Timepix3 data. Processed with CNN-ToT event localisation, chip edge correction, deterministic blur (sigma=0.5) and stored at two times super resolution. Split into 50 frames. Frames have a fluence of ~1.0 e-/A^2. Frames have been gain corrected.
Files:
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2. Raw, unprocessed Timepix3 data.
Category:
micrographs - single frame
Image format:
TPX3
No. of images or tilt series:
2978
Image size:
(512, 512)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(1.2, 1.2)
Details:
These are raw, unprocessed Timepix3 data. Recorded 1.5 s at a flux of 29 e/A^2/s with a 1.2 A pixelsize. Processing can be done using tpx3HitParser (https://doi.org/10.5281/zenodo.3641237) and generation of image frames using tpx3EventViewer (https://doi.org/10.5281/zenodo.3693989).
Files:
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